Publications

Our group publishes papers presenting new methodologies, describing the results of studies that use our software, and reviewing current topics in the field of Bioinformatics. Scroll down or click here for a complete list of papers produced by our lab. Since 2013, we write blog posts summarizing new research papers and review articles:

GWAS

Mouse Genetics

Population Structure

Review Articles

Publications

Show all

2013

He, Dan; Han, Buhm ; Eskin, Eleazar

Hap-seq: An Optimal Algorithm for Haplotype Phasing with Imputation Using Sequencing Data. Journal Article

J Comput Biol, 20 (2), pp. 80-92, 2013, ISSN: 1557-8666.

Abstract | Links | BibTeX | Tags: Haplotyping from Sequences, Imputation

Yang, Wen-Yun Y; Hormozdiari, Farhad ; Wang, Zhanyong ; He, Dan ; Pasaniuc, Bogdan ; Eskin, Eleazar

Leveraging Multi-SNP Reads from Sequencing Data for Haplotype Inference. Journal Article

Bioinformatics, 2013, ISSN: 1367-4811.

Abstract | Links | BibTeX | Tags: Haplotype Phasing, Haplotyping from Sequences, Imputation

2012

He, Dan; Han, Buhm ; Eskin, Eleazar

Hap-seq: An Optimal Algorithm for Haplotype Phasing with Imputation Using Sequencing Data Conference

Research in Computational Molecular Biology, Univ. of California Springer Berlin Heidelberg, 2012.

Abstract | Links | BibTeX | Tags: Haplotyping from Sequences

He, Dan; Eskin, Eleazar

Hap-seqX: Expedite Algorithm for Haplotype Phasing with Imputation using Sequence Data. Journal Article

Gene, 2012, ISSN: 1879-0038.

Abstract | Links | BibTeX | Tags: Haplotyping from Sequences, Imputation

2010

He, Dan; Choi, Arthur ; Pipatsrisawat, Knot ; Darwiche, Adnan ; Eskin, Eleazar

Optimal algorithms for haplotype assembly from whole-genome sequence data. Journal Article

Bioinformatics, 26 (12), pp. i183-90, 2010, ISSN: 1367-4811.

Abstract | Links | BibTeX | Tags: Haplotyping from Sequences