Publications

Our group publishes papers presenting new methodologies, describing the results of studies that use our software, and reviewing current topics in the field of Bioinformatics. Scroll down or click here for a complete list of papers produced by our lab. Since 2013, we write blog posts summarizing new research papers and review articles:

GWAS

Mouse Genetics

Population Structure

Review Articles

Publications

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2018

Hormozdiari, Farhad I; Jung, Junghyun; Eskin, Eleazar; Joo, Jong Wha J

Leveraging allelic heterogeneity to increase power of association testing Journal Article

bioRxiv, pp. 498360, 2018.

Abstract | Links | BibTeX | Tags: Alleliec Heterogeneity, Association Study Methods, Multi-SNP Association

Kang, Eun Yong; Lee, Cue Hyunkyu; Furlotte, Nicholas A; Joo, Jong Wha J; Kostem, Emrah; Zaitlen, Noah; Eskin, Eleazar; Han, Buhm

An Association Mapping Framework To Account for Potential Sex Difference in Genetic Architectures. Journal Article

Genetics, 2018, ISSN: 1943-2631.

Abstract | Links | BibTeX | Tags: Association Study Methods, Meta-Analysis

2015

Eskin, Eleazar

Discovering Genes Involved in Disease and the Mystery of Missing Heritability Journal Article

Commun. ACM, 58 (10), pp. 80-87, 2015, ISSN: 0001-0782.

Abstract | Links | BibTeX | Tags: Association Study Methods, Heritability, Review

2013

Kostem, Emrah; Eskin, Eleazar

Efficiently Identifying Significant Associations in Genome-Wide Association Studies Conference

Research in Computational Molecular Biology, University of California Springer Berlin Heidelberg, 2013.

Abstract | Links | BibTeX | Tags: Association Study Methods, Expression QTLs

Kostem, Emrah; Eskin, Eleazar

Efficiently Identifying Significant Associations in Genome-wide Association Studies. Journal Article

J Comput Biol, 20 (10), pp. 817-30, 2013, ISSN: 1557-8666.

Abstract | Links | BibTeX | Tags: Association Study Methods, Expression QTLs

2012

Darnell, Gregory; Duong, Dat ; Han, Buhm ; Eskin, Eleazar

Incorporating prior information into association studies. Journal Article

Bioinformatics, 28 (12), pp. i147-i153, 2012, ISSN: 1367-4811.

Abstract | Links | BibTeX | Tags: Association Priors, Association Study Methods

2011

Kostem, Emrah; Lozano, Jose A; Eskin, Eleazar

Increasing Power of Genome-wide Association Studies by Collecting Additional SNPs. Journal Article

Genetics, 2011, ISSN: 1943-2631.

Abstract | Links | BibTeX | Tags: Association Study Methods

Han, Buhm; Hackel, Brian M; Eskin, Eleazar

Postassociation cleaning using linkage disequilibrium information. Journal Article

Genet Epidemiol, 35 (1), pp. 1-10, 2011, ISSN: 1098-2272.

Abstract | Links | BibTeX | Tags: Association Study Methods

2010

Santana, Roberto; Mendiburu, Alexander ; Zaitlen, Noah ; Eskin, Eleazar ; Lozano, Jose A

Multi-marker tagging single nucleotide polymorphism selection using estimation of distribution algorithms. Journal Article

Artif Intell Med, 2010, ISSN: 1873-2860.

Abstract | Links | BibTeX | Tags: Association Study Methods

2009

Zaitlen, Noah; Kang, Hyun Min ; Eskin, Eleazar

Linkage Effects and Analysis of Finite Sample Errors in the HapMap. Journal Article

Hum Hered, 68 (2), pp. 73-86, 2009, ISSN: 1423-0062.

Abstract | Links | BibTeX | Tags: Association Study Methods

2008

Han, B; Kang, H M; Seo, M S; Zaitlen, N; Eskin, E

Efficient association study design via power-optimized tag SNP selection. Journal Article

Ann Hum Genet, 72 (Pt 6), pp. 834-47, 2008, ISSN: 1469-1809.

Abstract | Links | BibTeX | Tags: Association Study Methods

Choi, Arthur; Zaitlen, Noah ; Han, Buhm ; Pipatsrisawat, Knot ; Darwiche, Adnan ; Eskin, Eleazar

Efficient Genome Wide Tagging by Reduction to SAT Conference

Lecture Notes in Computer Science, 5251/2008 , Lecture Notes in Computer Science Springer Berlin / Heidelberg, 2008, ISSN: 0302-9743 (Print) 1611-3349 (Online).

Abstract | Links | BibTeX | Tags: Association Study Methods

Eskin, Eleazar

Increasing Power in Association Studies by Using Linkage Disequilibrium Structure and Molecular Function as Prior Information Conference

Lecture Notes in Computer Science, 4955/2008 , Lecture Notes in Computer Science Springer Berlin / Heidelberg, 2008, ISSN: 0302-9743 (Print) 1611-3349 (Online).

Abstract | Links | BibTeX | Tags: Association Priors, Association Study Methods

Eskin, Eleazar

Increasing power in association studies by using linkage disequilibrium structure and molecular function as prior information. Journal Article

Genome Res, 18 (4), pp. 653-60, 2008, ISSN: 1088-9051.

Abstract | Links | BibTeX | Tags: Association Priors, Association Study Methods

2007

Zaitlen, Noah; Kang, Hyun Min ; Eskin, Eleazar ; Halperin, Eran

Leveraging the HapMap correlation structure in association studies. Journal Article

Am J Hum Genet, 80 (4), pp. 683-91, 2007, ISSN: 0002-9297.

Abstract | Links | BibTeX | Tags: Association Study Methods

2005

Hinds, David A; Stuve, Laura L; Nilsen, Geoffrey B; Halperin, Eran ; Eskin, Eleazar ; Ballinger, Dennis G; Frazer, Kelly A; Cox, David R

Whole-genome patterns of common DNA variation in three human populations. Journal Article

Science, 307 (5712), pp. 1072-9, 2005, ISSN: 1095-9203.

Abstract | Links | BibTeX | Tags: Association Study Methods, Population Genetics